CDS

Accession Number TCMCG066C10341
gbkey CDS
Protein Id XP_034585924.1
Location join(4370033..4370428,4371659..4372893,4373142..4373283,4373374..4373481,4373921..4374133,4374222..4374332,4375386..4375580,4375728..4375902,4375987..4376027)
Gene LOC117848578
GeneID 117848578
Organism Setaria viridis

Protein

Length 871aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA633601
db_source XM_034730033.1
Definition pumilio homolog 1-like [Setaria viridis]

EGGNOG-MAPPER Annotation

COG_category J
Description Nucleic acid binding protein NABP
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
KEGG_ko ko:K17943        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs -

Sequence

CDS:  
ATGGTGACGGAGATGGCGGCGCGCGGCGGCGAGGCGTTCGGCGCGGAGGCGGACCGGGACTTCGAGGTCTTCCGCAGCGGCTCCGCGCCGCCCACCGTCGAGGGCGCCATGGGCGCCGCCGCGGCCGCCGGCAGCCTCTTCCTCGACGACGACCTCCGCGCCGACCCGGCCTACCAGAGCTACTACTACTCCAATGCGCACCTCAACCCGCGCCTCCCGCCGCCGCTGCTCTCCAAGGAGGACTGGCGCTCCTCGCACCACCGCCTCCGCTCCTCCGGCCTCGGCGGGATCGGGGACGGCAGGAGGCAGCAGCAGCCGGCGGCGGCTGCAGAAGGGACGGTGGGGCTGCCCGGGATCGATCTTGGTCGTCATAGGAGCTTCTCCAACGTCTTTCAGGATGACTCATACCAACGGGATATGGATAGGCAGACTGCCAACCACAATAGTAATGACTTGCTAGGTTCTTCTGGAATACAGTATGGCCTCCATCGTGGATCTGGAGCTATGGGAGGCCTGCACTCTAGTAATAATTCACGAGGCTTGGATGAAATTCAGAACAATGATTTATCATCAAATACATATGCTTCTATTTTAGGGTCATCGCTTTCTCGAAGTGCATCTCCAGATCCTGAGCTTGTGAGGAGGGCCCCTAGTCCATCTCTGCCTCCAATTGGTGTGAAAGTTGGTGCTAACGACAAGAAGATTAATGGTGGTTCGTCTTCTTTCCGCCGCAGTTCATCTGCTATAGGTGAATCTGATGATCTTGTGGCAGCTTTATCTGGGATGAGCTTATCATCTAGGGCAATGAGTGGGCAAACTATGGACCAGTCTCAGCTCTATCAGGATGTTGATAATGTCCAGAAATTTCTGTTTGATCGACAGGGTGACCAATCAAATGGCAATCAGCAGCACTCCTACATGAGACGTCCTGAGCATGGACAGTCTAAAGTACCTGATGGCTATTCTCCAAACTTGGCCAATTCATCTACGATGAGAAACCAGATTAATGCTGGCAGTTTCACATCATTTGACAATTTGTCACTTGGATCTGGCTTTGCTTCCCCTAGAATTGGTTCCAGATCCCCTGGCGGGACTGTATCTTCTCGACAAAATTTAGCTGGTATGTCTAACATGCTAAACTACAGTGGAATTGGAAGTCCAACTGCATCACCTTCCCTTCAGACTCCTATTGATCCAGCGTATATCCAGTACCTTGCTCAACTTGCAGCAAGCTGTGATGATCCTCTCATGGACAGGGGCCATCTGGGAAATTCTTACATGGACTTACTTGGTCCTCAGAAAGCTAACCTTGGCCCTTTACTTCAGTCACAAAAGCAATATGGTTACTATGGCAATCTTGGATTTAACCTTGGTTATGCTGGAAGTCCATTGACAAGTCCTGTTCTTCCCTCTTCACCTATTGCGCCAGGCAGTCCGCTTAGGCATGGTGATCGTAGCATGCGCTTTCCATCAGGCATGAGAAGCTTTGGTGGCTCCTTTGGTTCATGGAATTCAGGCATGGGTGGGAAGATGGATGCCAATTTGATGCCCTCGCTTCTGGAGGAATTCAAGAGCAACAAAAGTAAATCATATGAGCTCTCAGAAATAGCGGGCCATGTTGTTGAGTTTAGTGCGGATCAATACGGGAGCCGGTTCATACAACAAAAGCTAGAAACAGCCAGTACTGAAGAAAAAGACATGGTTTTCTCAGAAATCATGCCTCAAGCTCTCACACTGATGACTGATGTATTTGGAAATTATGTTGTTCAAAAGTTTTTTGAGCATGGAAGCACTGCCCAGATAAAGGAATTGGCTGGTCAACTTATTGGACGTGTCCTTGCTCTCAGTCTTCAGATGTATGGGTGCCGGGTTATACAGAAGGCTATCGAGGTCGTTGATTTAGATCTGCAGACTAAAATGGTTGCAGAGCTGGAGGGACATGTCATGCGTTGTGTACGTGATCAAAATGGGAACCATGTAATACAAAAATGCATAGAGTGCATTCCTCAGCATGCTATCGAGTTTATTGTCTCAACTTTCTATGGCCAAGTTGTAATGCTATCCACCCATCCATATGGTTGTCGAGTTATTCAGAGGGTTCTAGAGCACTGTGATGATCCTAAAACACAGCAAATAATGATGGATGAGATTCTCCAGTCTGTTTGCTTGCTAGCTCAGGACCAGTATGGCAATTACGTTGTTCAGCATGTTCTGGAACATGGCAAACCCCATGAGAGATCTGCTATTATTGAGAAGTTGATTGGCCAAATTGTGCAAATGAGCCAGCAAAAGTTTGCTTCAAATGTCATTGAGAAGTGCTTAGCCTTTGGAAATCCTGTAGAGCGCCAGGTTCTGATTGGCGAGATGCTTGGATCCACTAGTGAAAGTGAACCTCTTGAGGTAATGATGAAAGACCAGTTTGCTAACTATGTGGTGCAGAAGGTGTTAGAAACTTGTGATGATCAGCAGAGAGAGATGATCCTTACAAGGATAAAAACACATCTGAACACCCTCAAGAAGTACACCTACGGGAAGCACATAGTAGCACGCGTAGAGAAACTTGTTGCTGCTGGAGAGAAGCGCCTTGGGCTTCAACCAGCATGCACTGCTGCCTGA
Protein:  
MVTEMAARGGEAFGAEADRDFEVFRSGSAPPTVEGAMGAAAAAGSLFLDDDLRADPAYQSYYYSNAHLNPRLPPPLLSKEDWRSSHHRLRSSGLGGIGDGRRQQQPAAAAEGTVGLPGIDLGRHRSFSNVFQDDSYQRDMDRQTANHNSNDLLGSSGIQYGLHRGSGAMGGLHSSNNSRGLDEIQNNDLSSNTYASILGSSLSRSASPDPELVRRAPSPSLPPIGVKVGANDKKINGGSSSFRRSSSAIGESDDLVAALSGMSLSSRAMSGQTMDQSQLYQDVDNVQKFLFDRQGDQSNGNQQHSYMRRPEHGQSKVPDGYSPNLANSSTMRNQINAGSFTSFDNLSLGSGFASPRIGSRSPGGTVSSRQNLAGMSNMLNYSGIGSPTASPSLQTPIDPAYIQYLAQLAASCDDPLMDRGHLGNSYMDLLGPQKANLGPLLQSQKQYGYYGNLGFNLGYAGSPLTSPVLPSSPIAPGSPLRHGDRSMRFPSGMRSFGGSFGSWNSGMGGKMDANLMPSLLEEFKSNKSKSYELSEIAGHVVEFSADQYGSRFIQQKLETASTEEKDMVFSEIMPQALTLMTDVFGNYVVQKFFEHGSTAQIKELAGQLIGRVLALSLQMYGCRVIQKAIEVVDLDLQTKMVAELEGHVMRCVRDQNGNHVIQKCIECIPQHAIEFIVSTFYGQVVMLSTHPYGCRVIQRVLEHCDDPKTQQIMMDEILQSVCLLAQDQYGNYVVQHVLEHGKPHERSAIIEKLIGQIVQMSQQKFASNVIEKCLAFGNPVERQVLIGEMLGSTSESEPLEVMMKDQFANYVVQKVLETCDDQQREMILTRIKTHLNTLKKYTYGKHIVARVEKLVAAGEKRLGLQPACTAA